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Mid-Level Platform Engineer, Biotech

Clera · San Francisco

On-site / hybridDevOps / Cloud / SRE Today

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About the job

Skills mentioned in this posting (12)

PythonSQLAWSKubernetesCI/CDDockerAIMachine LearningTerraformCloudGoData Warehousing

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ABOUT THE ROLE Join the platform and data engineering team at an AI-focused biotech startup, building and operating infrastructure for sensitive clinical and biomedical data. Your work will help scientists and machine learning engineers access reliable, model-ready datasets and deploy data and models into partner environments. WHAT YOU'LL DO - Build and maintain cloud data infrastructure, including Kubernetes clusters, object storage, lakehouse layouts, catalogs, lineage, versioning, and data access systems. - Design and operate data warehouses and lifecycle processes for clinical records, molecular features, metadata, and versioned dataset releases. - Develop reproducible bioinformatics workflows for omics data, using workflow managers such as Nextflow and containerized cloud compute. - Build data quality checks, biological validation, and visualizations that help teams identify issues throughout processing. - Create reliable, versioned interfaces for preparing model-training datasets and delivering data alongside models to partner environments. - Own infrastructure reliability, observability, security, compliance controls, and cost optimization, including CI/CD and workload orchestration. WHAT WE'RE LOOKING FOR - Two to five years building data infrastructure and production pipelines, with experience in biotech, diagnostics, biobanking, or health data involving sensitive or biological information. - Production experience building and operating Kubernetes clusters, writing infrastructure as code with Terraform or similar tools, and designing CI/CD and deployment systems. - Strong production programming skills in Python and/or Go, with clean, tested, well-documented code and effective code review practices. - Experience with a major cloud provider, preferably AWS, distributed job orchestration, and large-scale data pipelines. - Familiarity with lakehouse and warehouse design, data catalogs, Docker, and workflow managers such as Nextflow. - Experience with GPU or machine learning infrastructure, distributed training, omics workflows, or clinical data standards such as OMOP and FHIR is valuable. - Knowledge of controls and audit practices for HIPAA, GDPR, or SOC 2 is beneficial; R or SQL experience is also useful. COMPENSATION & BENEFITS Salary range: $180,000 to $240,000 USD annually. Visa sponsorship is not available. LOCATION Hybrid role based in San Francisco, California.